STRINGSTRING
Noca_3700 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3700" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3700Hypothetical protein (473 aa)    
Predicted Functional Partners:
Noca_3701
Hypothetical protein (167 aa)
              0.659
Noca_3702
Carboxylate-amine ligase; ATP-dependent carboxylate-amine ligase which exhibits weak glutamate--cysteine ligase activity (376 aa)
              0.613
Noca_2037
Hypothetical protein (154 aa)
   
          0.566
Noca_2494
Hypothetical protein (115 aa)
   
          0.557
Noca_1468
ErfK/YbiS/YcfS/YnhG family protein (234 aa)
   
          0.529
Noca_4674
Alanine racemase domain-containing protein (351 aa)
   
          0.500
Noca_0374
Methyltransferase small (486 aa)
 
          0.476
Noca_3340
Hypothetical protein (303 aa)
   
          0.455
Noca_3994
Alpha,alpha-trehalose-phosphate synthase (482 aa)
   
   
  0.448
Noca_3989
HAD family hydrolase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose (281 aa)
   
   
  0.445
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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