STRINGSTRING
Noca_3706 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3706" - Diacylglycerol O-acyltransferase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3706Diacylglycerol O-acyltransferase (472 aa)    
Predicted Functional Partners:
Noca_2655
Diacylglycerol kinase catalytic subunit (291 aa)
         
    0.900
Noca_2917
Short chain dehydrogenase (665 aa)
   
   
  0.790
Noca_1232
Short-chain dehydrogenase/reductase SDR (305 aa)
   
          0.776
Noca_3479
PGAP1 family protein (378 aa)
 
          0.746
Noca_1065
PGAP1 family protein (281 aa)
 
          0.653
Noca_3705
Protein kinase (449 aa)
              0.621
Noca_3563
TetR family transcriptional regulator (203 aa)
   
          0.540
Noca_1064
Alpha/beta hydrolase fold protein (297 aa)
 
          0.497
Noca_4121
AMP-dependent synthetase and ligase (560 aa)
     
 
    0.476
Noca_1667
Hypothetical protein (358 aa)
   
          0.471
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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