STRINGSTRING
Noca_3720 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3720" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3720Hypothetical protein (225 aa)    
Predicted Functional Partners:
Noca_4152
Hypothetical protein (201 aa)
   
          0.776
Noca_4369
Hypothetical protein (146 aa)
   
          0.742
Noca_3719
Hypothetical protein (143 aa)
              0.738
Noca_0302
Hypothetical protein (163 aa)
 
          0.726
Noca_1983
Alpha/beta hydrolase fold protein (310 aa)
   
          0.718
Noca_0427
Short chain dehydrogenase (270 aa)
   
          0.717
Noca_4566
Abortive infection protein (233 aa)
   
          0.707
Noca_3635
Hypothetical protein (373 aa)
   
          0.706
Noca_0296
Hypothetical protein (493 aa)
   
          0.704
Noca_0426
Dihydrodipicolinate reductase (373 aa)
   
          0.687
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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