STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3720KEGG: nfa:nfa29830 hypothetical protein. (225 aa)    
Predicted Functional Partners:
Noca_4010
KEGG: mmc:Mmcs_1152 hypothetical protein.
 
     0.714
Noca_4369
KEGG: mmc:Mmcs_2007 hypothetical protein.
  
     0.712
Noca_1983
PFAM: alpha/beta hydrolase fold; KEGG: rha:RHA1_ro05212 probable hydrolase.
  
     0.710
Noca_3635
KEGG: mbo:Mb3194 hypothetical protein.
  
     0.708
Noca_3954
PFAM: nuclear transport factor 2; KEGG: rha:RHA1_ro03609 steroid delta-isomerase.
 
     0.703
Noca_4152
KEGG: mpa:MAP2481c hypothetical protein.
  
     0.691
Noca_3719
Hypothetical protein.
       0.658
Noca_4371
KEGG: nfa:nfa24570 hypothetical protein.
 
     0.636
Noca_0296
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; FAD dependent oxidoreductase; KEGG: mbo:Mb1848 hypothetical protein.
  
     0.635
Noca_4373
KEGG: nfa:nfa24590 hypothetical protein.
 
     0.623
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.