STRINGSTRING
Noca_3722 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3722" - Gluconate kinase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3722Gluconate kinase (160 aa)    
Predicted Functional Partners:
Noca_0003
6-phosphogluconate dehydrogenase (301 aa)
     
  0.996
Noca_2536
6-phosphogluconolactonase (241 aa)
 
  0.984
Noca_3724
Putative phosphodiesterase (222 aa)
              0.845
Noca_3723
Hypothetical protein (217 aa)
              0.845
Noca_3725
Hypothetical protein (172 aa)
              0.713
Noca_3721
Hypothetical protein (126 aa)
              0.619
Noca_4198
Short-chain dehydrogenase/reductase SDR (263 aa)
   
 
  0.610
Noca_3684
Short-chain dehydrogenase/reductase SDR (256 aa)
   
 
  0.610
Noca_2571
3-oxoacyl-ACP reductase (239 aa)
   
 
  0.610
Noca_1857
Short-chain dehydrogenase/reductase SDR (245 aa)
   
 
  0.610
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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