Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3741Hypothetical protein. (154 aa)    
Predicted Functional Partners:
Noca_3740
KEGG: fra:Francci3_2396 conserved hypothetical protein.
       0.737
Noca_2933
PFAM: 4Fe-4S ferredoxin, iron-sulfur binding domain protein; Polysulphide reductase, NrfD; KEGG: rha:RHA1_ro11226 probable polysulphide reductase.
   
    0.646
Noca_3742
PFAM: regulatory protein, ArsR; KEGG: fra:Francci3_3239 transcriptional regulator, ArsR family.
       0.566
Noca_1104
TIGRFAM: type I restriction-modification system, M subunit; PFAM: N-6 DNA methylase; KEGG: xfa:XF2728 type I restriction-modification system DNA methylase.
  
  
 0.416
Noca_1587
KEGG: stc:str1376 type II restriction-modification system modification subunit.
  
  
 0.416
Noca_1588
PFAM: type III restriction enzyme, res subunit; SMART: DEAD-like helicases-like; KEGG: spd:SPD_1079 type II restriction endonuclease, putative.
  
  
 0.416
Noca_1589
PFAM: Eco57I restriction endonuclease; KEGG: stc:str1375 type II restriction-modification system restriction subunit.
  
  
 0.416
Noca_3743
Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpd:RPD_3422 methyltransferase type 11.
       0.414
Noca_3744
TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: mmc:Mmcs_4522 arsenical-resistance protein.
       0.414
Noca_3745
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: sco:SCO6835 arsenate reductase.
       0.414
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: low (8%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.