STRINGSTRING
Noca_3743 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3743" - Type 11 methyltransferase in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3743Type 11 methyltransferase (267 aa)    
Predicted Functional Partners:
Noca_3745
Low molecular weight phosphotyrosine protein phosphatase (147 aa)
         
  0.915
Noca_3744
Arsenical-resistance protein (363 aa)
         
  0.911
Noca_3742
ArsR family transcriptional regulator (116 aa)
         
  0.782
Noca_4452
Type 11 methyltransferase (277 aa)
 
          0.624
Noca_2072
Integral membrane protein (225 aa)
 
          0.486
Noca_3741
Hypothetical protein (154 aa)
              0.483
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (345 aa)
         
  0.463
Noca_3740
Hypothetical protein (133 aa)
              0.460
Noca_4672
Sigma-70 region 2 domain-containing protein (203 aa)
   
          0.438
Noca_4517
Protein tyrosine phosphatase (196 aa)
         
  0.422
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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