STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3744TIGRFAM: arsenical-resistance protein; PFAM: Bile acid:sodium symporter; KEGG: mmc:Mmcs_4522 arsenical-resistance protein. (363 aa)    
Predicted Functional Partners:
Noca_3745
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: sco:SCO6835 arsenate reductase.
  
 0.995
Noca_3743
Methyltransferase type 11; PFAM: UbiE/COQ5 methyltransferase; Methyltransferase type 11; Methyltransferase type 12; KEGG: rpd:RPD_3422 methyltransferase type 11.
 
   
 0.840
Noca_3742
PFAM: regulatory protein, ArsR; KEGG: fra:Francci3_3239 transcriptional regulator, ArsR family.
 
  
 0.792
Noca_2803
Transcriptional regulator, ArsR family; PFAM: low molecular weight phosphotyrosine protein phosphatase; regulatory protein, ArsR; KEGG: mmc:Mmcs_4520 transcriptional regulator, ArsR family.
 
  
 0.766
Noca_3081
PFAM: arsenate reductase and related; KEGG: mxa:MXAN_3126 putative arsenate reductase; Belongs to the ArsC family.
     
 0.499
Noca_3111
Arsenite efflux ATP-binding protein ArsA; PFAM: Anion-transporting ATPase; KEGG: rxy:Rxyl_1314 arsenite-activated ATPase (ArsA); TC 3.A.4.1.1.
     
 0.459
Noca_0068
KEGG: ret:RHE_PE00355 putative inulin fructotransferase protein.
  
  
 0.457
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
  
  
 0.457
Noca_4517
PFAM: low molecular weight phosphotyrosine protein phosphatase; KEGG: tfu:Tfu_2341 protein-tyrosine-phosphatase.
  
  
 0.457
Noca_3741
Hypothetical protein.
       0.414
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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