STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3749PFAM: aldo/keto reductase; KEGG: tfu:Tfu_1674 putative oxidoreductase. (326 aa)    
Predicted Functional Partners:
Noca_3750
Hypothetical protein.
       0.682
Noca_2688
PFAM: aldo/keto reductase; KEGG: sco:SCO7356 oxidoreductase.
 
 
 0.600
Noca_4436
PFAM: aldo/keto reductase; KEGG: ecj:JW1403 predicted oxidoreductase, NAD(P)-binding.
  
     0.578
xylA
Xylose isomerase; KEGG: sma:SAV7182 putative xylose isomerase; TIGRFAM: xylose isomerase; PFAM: Xylose isomerase domain protein TIM barrel; Belongs to the xylose isomerase family.
 
     0.523
Noca_3751
KEGG: mpa:MAP1582c hypothetical protein.
       0.505
Noca_1698
Hypothetical protein.
  
   0.413
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.