STRINGSTRING
Noca_3774 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3774" - Peptidase M23B in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3774Peptidase M23B (266 aa)    
Predicted Functional Partners:
Noca_3773
Prolipoprotein diacylglyceryl transferase (264 aa)
     
      0.739
Noca_4676
Glycosyl transferase family protein (778 aa)
   
   
  0.686
Noca_4486
Glycoside hydrolase family protein (468 aa)
 
   
  0.669
Noca_3345
Peptidase M23B (188 aa)
   
          0.625
Noca_0326
Glycosyl transferase family protein (807 aa)
   
   
  0.622
Noca_4513
Glycoside hydrolase family 3 protein (388 aa)
 
   
  0.619
murC
UDP-N-acetylmuramate--L-alanine ligase; Cell wall formation (446 aa)
 
      0.581
Noca_3384
Glycoside hydrolase family 3 protein (631 aa)
 
   
  0.570
Noca_0754
Lytic transglycosylase catalytic subunit (291 aa)
 
   
  0.545
Noca_1269
Cell division protein FtsX; Part of the ABC transporter FtsEX involved in cellular division (303 aa)
 
 
      0.539
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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