STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3776PFAM: protein of unknown function DUF214; KEGG: dvu:DVUA0023 ABC transporter, permease protein, putative. (380 aa)    
Predicted Functional Partners:
Noca_3775
PFAM: ABC transporter related; YHS domain protein; SMART: AAA ATPase; TRASH domain protein; KEGG: rpe:RPE_3321 ABC transporter related.
  
 
 0.960
Noca_3777
PFAM: protein of unknown function DUF214; KEGG: bpm:BURPS1710b_A1034 ABC transporter, permease protein.
 
    
0.829
Noca_0968
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL1681 putative ABC transporter, ATP-binding protein.
  
 
 0.720
Noca_1606
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rha:RHA1_ro03122 ABC lipoprotein transporter, ATP-binding component.
  
 
 0.720
Noca_1607
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO6367 ABC transporter ATP-binding protein.
  
 
 0.720
Noca_1717
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: afu:AF1018 ABC transporter, ATP-binding protein.
  
 
 0.720
Noca_2866
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO2674 ABC transporter ATP-binding protein.
  
 
 0.720
Noca_3961
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO3089 putative ABC transporter ATP-binding protein.
  
 
 0.720
Noca_3778
Hypothetical protein.
       0.697
Noca_3779
KEGG: rha:RHA1_ro11211 hypothetical protein.
       0.697
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.