STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3789PFAM: N-acetylmuramoyl-L-alanine amidase, family 2; SMART: Animal peptidoglycan recognition protein PGRP; KEGG: sco:SCO3040 secreted protein. (591 aa)    
Predicted Functional Partners:
Noca_3790
PFAM: Methyltransferase type 11; Methyltransferase type 12; KEGG: mpa:MAP0199 hypothetical protein.
       0.648
Noca_3791
Hypothetical protein.
       0.648
Noca_3788
Heavy metal translocating P-type ATPase; TIGRFAM: ATPase, P-type (transporting), HAD superfamily, subfamily IC; copper-translocating P-type ATPase; heavy metal translocating P-type ATPase; PFAM: Haloacid dehalogenase domain protein hydrolase; Heavy metal transport/detoxification protein; E1-E2 ATPase-associated domain protein; KEGG: rha:RHA1_ro11213 probable copper resistance transporter, ATPase component.
  
    0.445
Noca_0320
KEGG: sma:SAV4558 hypothetical protein.
  
     0.435
Noca_3124
PFAM: NLP/P60 protein; KEGG: sco:SCO4793 NPL/P60 family secreted protein.
  
  
 0.431
Noca_2818
KEGG: sma:SAV5893 hypothetical protein.
 
 0.403
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.