STRINGSTRING
Noca_3789 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3789" - N-acetylmuramoyl-L-alanine amidase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3789N-acetylmuramoyl-L-alanine amidase (591 aa)    
Predicted Functional Partners:
Noca_3791
Hypothetical protein (152 aa)
              0.728
Noca_3790
Type 11 methyltransferase (196 aa)
              0.728
Noca_0474
Hypothetical protein (256 aa)
   
          0.519
Noca_0320
Hypothetical protein (197 aa)
   
          0.492
Noca_3788
Heavy metal translocating P-type ATPase (785 aa)
              0.489
Noca_2636
Hypothetical protein (299 aa)
   
          0.442
Noca_3787
Heavy metal transport/detoxification protein (72 aa)
              0.439
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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