STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3792Hypothetical protein. (87 aa)    
Predicted Functional Partners:
Noca_1404
PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: lxx:Lxx05010 lipopolysaccharide exporter.
  
 
 0.972
Noca_1401
PFAM: UDP-galactopyranose mutase; KEGG: rha:RHA1_ro04053 UDP-galactopyranose mutase.
  
  
 0.696
Noca_1399
PFAM: glycosyl transferase, family 2; KEGG: cdi:DIP0168 putative glycosyl transferase.
  
  
 0.674
Noca_1400
PFAM: glycosyl transferase, family 2; KEGG: mth:MTH348 rhamnosyl transferase.
  
  
 0.674
Noca_1402
KEGG: rha:RHA1_ro04054 possible glycosyltransferase.
  
  
 0.598
Noca_0022
PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: tfu:Tfu_3066 tyrosine protein kinase:serine/threonine protein kinase:PASTA.
  
    0.481
Noca_3086
PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: sco:SCO2110 putative eukaryotic-type serine/threonine protein kinase.
  
    0.481
Noca_4583
PFAM: glycosyl transferase, family 2; KEGG: tfu:Tfu_1639 similar to glycosyltransferase.
  
  
 0.475
Noca_4568
PFAM: CsbD family protein; KEGG: rha:RHA1_ro04155 hypothetical protein; Belongs to the UPF0337 (CsbD) family.
  
    0.436
Noca_0179
KEGG: tfu:Tfu_0071 hypothetical protein.
     
 0.431
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.