STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3801PFAM: protein of unknown function DUF1130; KEGG: rha:RHA1_ro08282 hypothetical protein. (154 aa)    
Predicted Functional Partners:
Noca_2101
PFAM: multicopper oxidase, type 3; KEGG: pac:PPA0092 hypothetical protein.
  
     0.505
Noca_3803
Hypothetical protein; KEGG: fra:Francci3_3745 superfamily I DNA and RNA helicases and helicase subunits-like.
       0.484
Noca_3980
PFAM: Hemerythrin HHE cation binding domain protein; KEGG: pac:PPA0240 hypothetical protein.
 
     0.479
Noca_3802
Hypothetical protein.
       0.478
Noca_3979
PFAM: C4-dicarboxylate transporter/malic acid transport protein; KEGG: rfr:Rfer_4140 C4-dicarboxylate transporter/malic acid transport protein.
  
     0.456
Noca_3004
KEGG: ade:Adeh_3192 hypothetical protein.
  
     0.452
Noca_2018
PFAM: phosphoribosyltransferase; dienelactone hydrolase; KEGG: mbo:Mb0586c hypothetical protein.
 
     0.432
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.