STRINGSTRING
Noca_3840 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3840" - Short-chain dehydrogenase/reductase SDR in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3840Short-chain dehydrogenase/reductase SDR (262 aa)    
Predicted Functional Partners:
Noca_4562
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase (736 aa)
   
  0.987
Noca_4142
acetyl-CoA acetyltransferase (397 aa)
   
  0.974
Noca_2764
acetyl-CoA acetyltransferase (387 aa)
   
  0.974
Noca_1828
acetyl-CoA acetyltransferase (406 aa)
   
  0.974
Noca_1797
acetyl-CoA acetyltransferase (396 aa)
   
  0.974
Noca_1371
acetyl-CoA acetyltransferase (404 aa)
   
  0.974
Noca_2127
enoyl-CoA hydratase/isomerase (331 aa)
   
  0.974
Noca_0811
Short chain enoyl-CoA hydratase (255 aa)
   
  0.974
Noca_4110
Short chain enoyl-CoA hydratase (265 aa)
   
  0.969
Noca_1521
Short chain enoyl-CoA hydratase / enoyl-CoA hydratase (279 aa)
   
  0.969
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (8%) [HD]