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dapF protein (Nocardioides sp. JS614) - STRING interaction network
"dapF" - Diaminopimelate epimerase in Nocardioides sp. JS614
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second shell of interactors
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Score
dapFDiaminopimelate epimerase; Catalyzes the stereoinversion of LL-2,6- diaminoheptanedioate (L,L-DAP) to meso-diaminoheptanedioate (meso- DAP), a precursor of L-lysine and an essential component of the bacterial peptidoglycan (279 aa)    
Predicted Functional Partners:
lysA
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (466 aa)
 
 
  0.996
Noca_1200
Succinyl-diaminopimelate desuccinylase (354 aa)
 
   
  0.983
Noca_3068
UDP-N-acetylmuramoylalanyl-D-glutamate--2, 6-diaminopimelate ligase (504 aa)
 
 
  0.966
dapA
Dihydrodipicolinate synthase; Catalyzes the condensation of (S)-aspartate-beta- semialdehyde [(S)-ASA] and pyruvate to 4-hydroxy- tetrahydrodipicolinate (HTPA) (298 aa)
 
   
  0.900
Noca_0321
Aspartate kinase (424 aa)
 
 
  0.897
dapB
Dihydrodipicolinate reductase; Catalyzes the conversion of 4-hydroxy- tetrahydrodipicolinate (HTPA) to tetrahydrodipicolinate (247 aa)
 
   
  0.894
miaA
tRNA delta(2)-isopentenylpyrophosphate transferase; Catalyzes the transfer of a dimethylallyl group onto the adenine at position 37 in tRNAs that read codons beginning with uridine, leading to the formation of N6-(dimethylallyl)adenosine (i(6)A) (310 aa)
   
        0.882
carB
Carbamoyl-phosphate synthase large subunit (1143 aa)
 
   
  0.880
Noca_3842
Bifunctional deaminase-reductase-like protein (185 aa)
              0.861
dapD
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-succinyltransferase; Catalyzes the conversion of the cyclic tetrahydrodipicolinate (THDP) into the acyclic N-succinyl-L-2- amino-6-oxopimelate using succinyl-CoA (320 aa)
 
   
  0.786
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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