STRINGSTRING
Noca_3850 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3850" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3850Hypothetical protein (154 aa)    
Predicted Functional Partners:
Noca_2097
Glucose-methanol-choline oxidoreductase (470 aa)
   
          0.610
Noca_2604
acyl-CoA dehydrogenase domain-containing protein (405 aa)
   
          0.597
Noca_2603
acyl-CoA dehydrogenase domain-containing protein (456 aa)
   
          0.578
Noca_3851
Protein PASTA domain-containing protein (294 aa)
              0.575
Noca_2849
Dehydratase (288 aa)
   
          0.533
Noca_0074
Hypothetical protein (134 aa)
   
          0.467
tam
Trans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate (269 aa)
              0.450
Noca_1730
Regulatory protein TetR (201 aa)
   
          0.437
Noca_3478
Cyclase/dehydrase (160 aa)
   
          0.434
Noca_4409
Hypothetical protein (274 aa)
   
          0.431
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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