STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3850KEGG: abo:ABO_1590 hypothetical protein. (154 aa)    
Predicted Functional Partners:
Noca_2604
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: pau:PA14_66040 putative acyl-CoA dehydrogenase.
 
  
 0.654
Noca_1730
PFAM: regulatory protein, TetR; KEGG: mmc:Mmcs_1257 transcriptional regulator, TetR family.
  
     0.630
Noca_2917
Male sterility C-terminal domain; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; Male sterility C-terminal domain; KR; KEGG: hch:HCH_04995 short-chain alcohol dehydrogenase-like protein.
 
     0.615
Noca_3667
PFAM: fatty acid desaturase; KEGG: rha:RHA1_ro01720 probable fatty acid desaturase.
  
  
 0.615
Noca_3706
Diacylglycerol O-acyltransferase; PFAM: protein of unknown function UPF0089; KEGG: rha:RHA1_ro08645 hypothetical protein; Belongs to the long-chain O-acyltransferase family.
 
   
 0.611
Noca_3767
PFAM: fatty acid desaturase; KEGG: fal:FRAAL6454 linoleoyl-CoA desaturase (delta(6)-desaturase).
  
  
 0.605
Noca_1232
PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro06221 possible dehydrogenase; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.592
Noca_4480
PFAM: fatty acid desaturase; KEGG: fal:FRAAL6454 linoleoyl-CoA desaturase (delta(6)-desaturase).
  
  
 0.586
Noca_4560
PFAM: Phosphoglycerate mutase; KEGG: mxa:MXAN_5898 hypothetical protein.
 
     0.576
Noca_2603
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: rha:RHA1_ro06400 butyryl-CoA dehydrogenase.
 
  
 0.551
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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