STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3853PFAM: regulatory protein, MarR; KEGG: sco:SCO3133 MarR-family regulator. (162 aa)    
Predicted Functional Partners:
tam
Trans-aconitate 2-methyltransferase; Catalyzes the S-adenosylmethionine monomethyl esterification of trans-aconitate.
     
 0.676
Noca_0619
PFAM: protein of unknown function DUF6, transmembrane; KEGG: nfa:nfa30730 hypothetical protein.
 
  
 0.645
Noca_4367
PFAM: protein of unknown function DUF6, transmembrane; KEGG: sco:SCO2646 integral membrane protein.
 
  
 0.639
Noca_2143
PFAM: regulatory protein, MarR; KEGG: mmc:Mmcs_5446 transcriptional regulator, MarR family.
  
     0.509
Noca_3851
PFAM: PASTA domain containing protein.
       0.430
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.