STRINGSTRING
Noca_3908 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3908" - Integral membrane protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3908Integral membrane protein (207 aa)    
Predicted Functional Partners:
Noca_3909
Secreted protein (371 aa)
 
          0.968
Noca_3907
Hypothetical protein (362 aa)
 
          0.962
Noca_3911
Hypothetical protein (430 aa)
 
          0.960
Noca_3910
ATPase (332 aa)
 
          0.876
Noca_3912
Integral membrane protein (331 aa)
   
          0.756
Noca_3913
RDD domain-containing protein (269 aa)
   
          0.735
Noca_3635
Hypothetical protein (373 aa)
   
          0.584
Noca_2758
Hypothetical protein (441 aa)
   
          0.534
Noca_4376
Putative integral membrane protein (250 aa)
   
          0.530
Noca_2907
Hypothetical protein (213 aa)
   
          0.480
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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