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Noca_3932 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3932" - Cold-shock DNA-binding protein family protein in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
Coexpression
Experiments
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[Homology]
Score
Noca_3932Cold-shock DNA-binding protein family protein (131 aa)    
Predicted Functional Partners:
deaD
DEAD/DEAH box helicase; DEAD-box RNA helicase involved in various cellular processes at low temperature, including ribosome biogenesis, mRNA degradation and translation initiation (589 aa)
   
  0.790
Noca_4567
DEAD/DEAH box helicase domain-containing protein (507 aa)
   
  0.790
Noca_1469
DEAD/DEAH box helicase (479 aa)
   
  0.790
Noca_3933
Hydrolase (472 aa)
              0.682
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta’ subunit thereby facilitating its interaction with the beta and alpha subunits (110 aa)
 
   
  0.619
Noca_3692
ATP-dependent helicase HrpA (1282 aa)
       
  0.596
dnaK
Chaperone protein DnaK; Acts as a chaperone (621 aa)
   
  0.592
Noca_2690
Cyclophilin type peptidyl-prolyl cis-trans isomerase (225 aa)
   
  0.571
Noca_0017
Peptidyl-prolyl isomerase; PPIases accelerate the folding of proteins. It catalyzes the cis-trans isomerization of proline imidic peptide bonds in oligopeptides (170 aa)
   
  0.571
rpoA
DNA-directed RNA polymerase subunit alpha; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (338 aa)
     
  0.558
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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