STRINGSTRING
Noca_3965 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3965" - LemA family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3965LemA family protein (187 aa)    
Predicted Functional Partners:
Noca_3966
Major facilitator transporter (1075 aa)
              0.661
htpX
Heat shock protein HtpX (309 aa)
 
     
  0.595
Noca_3964
Hypothetical protein (322 aa)
              0.487
Noca_4396
Peptidase M48, Ste24p (364 aa)
         
  0.410
Noca_3122
Peptidase M48, Ste24p (411 aa)
         
  0.410
Noca_4360
Regulatory protein MerR (144 aa)
              0.407
Noca_4234
Regulatory protein MerR (96 aa)
              0.407
Noca_2712
Regulatory protein MerR (246 aa)
              0.407
Noca_2710
Regulatory protein MerR (198 aa)
              0.407
Noca_2198
MerR family transcriptional regulator (135 aa)
              0.407
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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