Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_3971PFAM: transcriptional regulator domain protein; KEGG: nfa:nfa41070 hypothetical protein. (411 aa)    
Predicted Functional Partners:
Noca_3315
Dihydroxyacetone kinase DhaL subunit; PFAM: Dak phosphatase; KEGG: tfu:Tfu_1716 glycerone kinase.
   
 
 0.555
Noca_3316
Dihydroxyacetone kinase DhaK subunit; PFAM: Dak kinase; KEGG: tfu:Tfu_1716 glycerone kinase.
   
 
 0.555
Noca_2092
PFAM: aldehyde dehydrogenase; KEGG: sma:SAV7177 putative aldehyde dehydrogenase; Belongs to the aldehyde dehydrogenase family.
 
 
 
 0.487
Noca_3970
PFAM: ferredoxin; [2Fe-2S]-binding domain protein; KEGG: rha:RHA1_ro04977 carbon monoxide dehydrogenase small subunit (ferredoxin).
       0.468
Noca_3969
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rha:RHA1_ro04976 carbon monoxide dehydrogenase large subunit.
       0.463
Noca_3967
PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rxy:Rxyl_0120 carbon monoxide dehydrogenase subunit G.
 
     0.459
Noca_4290
PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: sco:SCO0542 hypothetical regulatory protein.
  
     0.437
Noca_0109
KEGG: sco:SCO1740 hypothetical protein.
  
    0.406
Noca_4477
KEGG: pol:Bpro_0362 extracellular solute-binding protein, family 3.
 
     0.405
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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