STRINGSTRING
Noca_3971 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3971" - Transcriptional regulator domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3971Transcriptional regulator domain-containing protein (411 aa)    
Predicted Functional Partners:
Noca_3316
Glycerone kinase (333 aa)
   
      0.714
Noca_3315
Dak phosphatase (207 aa)
   
      0.714
Noca_2092
Aldehyde dehydrogenase (507 aa)
 
 
 
  0.620
Noca_4454
Dehydrogenase, E1 component (726 aa)
   
   
  0.569
Noca_0109
Hypothetical protein (797 aa)
   
          0.554
Noca_3969
Xanthine dehydrogenase, molybdenum binding subunit apoprotein (835 aa)
              0.515
Noca_3970
2Fe-2S iron-sulfur cluster binding domain-containing protein (156 aa)
              0.514
Noca_0307
Hypothetical protein (451 aa)
   
          0.441
Noca_3967
Carbon monoxide dehydrogenase subunit G (246 aa)
              0.439
Noca_3968
Carbon monoxide dehydrogenase, medium subunit (284 aa)
              0.426
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (6%) [HD]