STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3975PFAM: AAA ATPase, central domain protein; ATPase associated with various cellular activities, AAA_3; ATPase associated with various cellular activities, AAA_5; SMART: AAA ATPase; KEGG: rha:RHA1_ro04979 probable ATPase, MoxR family. (294 aa)    
Predicted Functional Partners:
Noca_3974
PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor, type A; KEGG: rha:RHA1_ro04978 hypothetical protein.
 
   
 0.874
Noca_0238
PFAM: VWA containing CoxE family protein; SMART: von Willebrand factor, type A; KEGG: rxy:Rxyl_0115 VWA containing CoxE-like protein.
 
   
 0.786
Noca_0292
PFAM: VWA containing CoxE family protein; KEGG: fal:FRAAL1933 hypothetical protein.
 
  
 0.742
Noca_3976
KEGG: rha:RHA1_ro04499 hypothetical protein.
 
     0.691
Noca_3969
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: rha:RHA1_ro04976 carbon monoxide dehydrogenase large subunit.
 
   
 0.658
Noca_0224
TIGRFAM: carbon-monoxide dehydrogenase, large subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding; KEGG: mmc:Mmcs_0491 carbon-monoxide dehydrogenase, large subunit.
 
   
 0.559
Noca_0230
Xanthine dehydrogenase, molybdenum binding subunit apoprotein; KEGG: rha:RHA1_ro05232 possible carbon monoxide dehydrogenase; TIGRFAM: carbon-monoxide dehydrogenase, large subunit; PFAM: aldehyde oxidase and xanthine dehydrogenase, a/b hammerhead; aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding.
 
   
 0.527
Noca_3977
Hypothetical protein.
  
    0.524
Noca_3978
Sigma-70, region 4 type 2; PFAM: sigma-70 region 2 domain protein; sigma-70 region 4 domain protein; Sigma-70, region 4 type 2; KEGG: cdi:DIP0880 putative RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
  
    0.522
Noca_1492
PFAM: carbon monoxide dehydrogenase subunit G; KEGG: rha:RHA1_ro03488 possible carbon monoxide dehydrogenase protein G.
 
   
 0.505
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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