STRINGSTRING
Noca_3985 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3985" - GDSL family lipase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3985GDSL family lipase (298 aa)    
Predicted Functional Partners:
Noca_4529
Anthranilate synthase component I/chorismate-binding protein (666 aa)
   
   
  0.704
Noca_3986
Sulfur transfer protein ThiS (93 aa)
              0.638
Noca_0878
Pyridoxamine 5’-phosphate oxidase-like protein (132 aa)
   
        0.612
Noca_1058
Secreted protein (222 aa)
   
          0.610
Noca_3987
Threonine synthase (424 aa)
              0.583
Noca_2699
Hypothetical protein (451 aa)
   
          0.548
Noca_3102
Hypothetical protein (294 aa)
   
          0.530
Noca_2841
Hypothetical protein (313 aa)
   
        0.526
Noca_3805
Hypothetical protein (233 aa)
   
          0.511
Noca_4388
Nitroreductase (211 aa)
   
          0.501
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (9%) [HD]