STRINGSTRING
Noca_4004 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4004" - Succinate-semialdehyde dehydrogenase in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4004Succinate-semialdehyde dehydrogenase (519 aa)    
Predicted Functional Partners:
Noca_3205
4-aminobutyrate aminotransferase (450 aa)
         
    0.936
Noca_0645
4-aminobutyrate aminotransferase (452 aa)
         
    0.936
Noca_0122
Alkane 1-monooxygenase (481 aa)
   
   
    0.920
Noca_4627
Hypothetical protein (435 aa)
         
    0.917
Noca_4177
Alcohol dehydrogenase (358 aa)
   
   
    0.917
Noca_4626
Methylmalonate-semialdehyde dehydrogenase (498 aa)
   
   
 
0.909
katG
Catalase/peroxidase HPI; Bifunctional enzyme with both catalase and broad- spectrum peroxidase activity (760 aa)
       
    0.901
Noca_4562
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase (736 aa)
         
    0.900
Noca_4460
Alcohol dehydrogenase (319 aa)
         
    0.900
Noca_4343
Catalase domain-containing protein; Has an organic peroxide-dependent peroxidase activity (303 aa)
         
    0.900
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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