STRINGSTRING
Noca_4008 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4008" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4008Hypothetical protein (197 aa)    
Predicted Functional Partners:
Noca_2213
Hypothetical protein (241 aa)
   
          0.777
Noca_1256
TadE family protein (127 aa)
   
          0.540
Noca_3787
Heavy metal transport/detoxification protein (72 aa)
 
          0.502
Noca_4007
Hypothetical protein (249 aa)
              0.472
Noca_1255
Hypothetical protein (68 aa)
   
          0.465
Noca_3747
Heavy metal transport/detoxification protein (69 aa)
              0.408
Noca_1791
Hypothetical protein (180 aa)
   
          0.409
Noca_3788
Heavy metal translocating P-type ATPase (785 aa)
         
  0.406
Noca_3746
Heavy metal translocating P-type ATPase (1071 aa)
         
  0.406
Noca_2922
Copper-translocating P-type ATPase (928 aa)
         
  0.406
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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