STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4013KEGG: sma:SAV6531 hypothetical protein. (195 aa)    
Predicted Functional Partners:
Noca_4014
Hypothetical protein; KEGG: rno:315071 procollagen, type XXII, alpha 1 (predicted).
       0.818
Noca_4017
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; KEGG: fal:FRAAL3359 putative sulfate-transporting ATPase; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
       0.813
Noca_4015
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_1835 ABC transporter related; TC 3.A.1.4.-.
       0.785
Noca_4016
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: fal:FRAAL2623 hypothetical protein; putative membrane protein involved in branched-chain amino acid transport, ATP-binding; TC 3.A.1.4.-.
       0.774
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.