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Noca_4018 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4018" - ABC-type branched-chain amino acid transport systems periplasmic component-like in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4018ABC-type branched-chain amino acid transport systems periplasmic component-like (481 aa)    
Predicted Functional Partners:
Noca_1183
ABC-type branched-chain amino acid transport systems periplasmic component-like (448 aa)
         
    0.900
Noca_0218
ABC-type branched-chain amino acid transport systems periplasmic component-like (448 aa)
         
    0.900
Noca_1581
Hypothetical protein (334 aa)
   
          0.758
Noca_2258
Hypothetical protein (334 aa)
   
          0.751
Noca_0051
Hypothetical protein (280 aa)
   
          0.727
Noca_4017
Inner-membrane translocator (697 aa)
   
          0.707
Noca_3309
Peroxiredoxins-like protein (192 aa)
   
          0.689
Noca_2941
Hypothetical protein (410 aa)
   
          0.676
Noca_2280
Type III restriction enzyme, res subunit (558 aa)
   
          0.607
Noca_4019
Metallophosphoesterase (480 aa)
              0.580
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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