Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_4018Amino acid/amide ABC transporter substrate-binding protein, HAAT family; KEGG: rme:Rmet_5877 extracellular ligand-binding receptor; TC 3.A.1.4.-. (481 aa)    
Predicted Functional Partners:
Noca_4017
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; KEGG: fal:FRAAL3359 putative sulfate-transporting ATPase; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.934
Noca_0216
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: dra:DRA0261 branched-chain amino acid transport system ATP-binding protein; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.688
Noca_2146
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_1891 ABC transporter related; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.688
Noca_4103
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: bpe:BP0620 branched-chain amino acid ABC transporter, permease protein; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
  
 0.688
Noca_4441
PFAM: inner-membrane translocator; ABC transporter related; KEGG: bme:BMEII0874 high-affinity branched-chain amino acid transport system permease protein LivH / high-affinity branched-chain amino acid transport ATP-binding protein LivG; TC 3.A.1.4.-; TC 3.A.1.4.-.
  
  
 0.688
Noca_3309
KEGG: fal:FRAAL0869 hypothetical protein.
  
     0.671
Noca_2899
Hypothetical protein.
  
     0.615
Noca_0920
KEGG: cya:CYA_1212 phosphate uptake transporter (PhoT) ABC transporter family, substrate-binding protein; TC 3.A.1.7.1.
  
   
 0.568
Noca_1561
PFAM: phosphoesterase, PA-phosphatase related; KEGG: vpa:VP2408 hypothetical protein.
 
     0.537
Noca_4015
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rfr:Rfer_1835 ABC transporter related; TC 3.A.1.4.-.
 
  
 0.529
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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