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Noca_4020 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4020" - RNA methyltransferase in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4020RNA methyltransferase (314 aa)    
Predicted Functional Partners:
cysS
cysteinyl-tRNA synthetase (471 aa)
   
      0.923
Noca_4306
Serine O-acetyltransferase (202 aa)
   
        0.768
pheT
phenylalanyl-tRNA synthetase subunit beta (827 aa)
 
   
  0.731
Noca_2017
Ribonuclease II (467 aa)
   
      0.674
rpsR
30S ribosomal protein S18; Binds as a heterodimer with protein S6 to the central domain of the 16S rRNA, where it helps stabilize the platform of the 30S subunit (78 aa)
 
      0.666
Noca_4022
Hypothetical protein (398 aa)
              0.660
rplT
50S ribosomal protein L20; Binds directly to 23S ribosomal RNA and is necessary for the in vitro assembly process of the 50S ribosomal subunit. It is not involved in the protein synthesizing functions of that subunit (130 aa)
   
 
  0.611
rplA
50S ribosomal protein L1P; Binds directly to 23S rRNA. The L1 stalk is quite mobile in the ribosome, and is involved in E site tRNA release (259 aa)
   
 
  0.604
era
GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism (313 aa)
 
   
  0.595
thrS
threonyl-tRNA synthetase (668 aa)
   
 
  0.589
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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