STRINGSTRING
Noca_4022 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4022" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4022Hypothetical protein (398 aa)    
Predicted Functional Partners:
cysS
cysteinyl-tRNA synthetase (471 aa)
              0.660
Noca_4020
RNA methyltransferase (314 aa)
              0.660
Noca_4191
Zinc-binding CMP/dCMP deaminase (147 aa)
   
          0.603
Noca_0255
Major facilitator transporter (440 aa)
   
          0.553
Noca_2037
Hypothetical protein (154 aa)
   
          0.545
Noca_0488
Hypothetical protein (384 aa)
   
          0.528
Noca_3126
Hypothetical protein (425 aa)
   
          0.486
Noca_4019
Metallophosphoesterase (480 aa)
              0.464
Noca_4448
Putative integral membrane protein (239 aa)
   
          0.423
Noca_1062
Hypothetical protein (206 aa)
   
          0.418
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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