STRINGSTRING
Noca_4027 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4027" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4027Hypothetical protein (207 aa)    
Predicted Functional Partners:
Noca_4030
Microcompartments protein (104 aa)
 
          0.877
Noca_4026
Hypothetical protein (108 aa)
              0.859
Noca_4028
Ethanolamine utilization protein EutJ family protein (283 aa)
              0.749
Noca_4029
Ethanolamine utilisation EutQ family protein (187 aa)
              0.637
Noca_4036
Ethanolamine utilization protein EutN/carboxysome structural protein Ccml (96 aa)
 
          0.624
Noca_2656
DSH domain-containing protein (936 aa)
   
          0.533
Noca_4025
Nitrite reductase (NAD(P)H) small subunit (127 aa)
              0.483
Noca_2264
Phage integrase family protein (797 aa)
   
          0.450
Noca_2264
Phage integrase family protein (797 aa)
   
          0.450
Noca_4031
Acetaldehyde dehydrogenase (511 aa)
              0.424
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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