STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4027KEGG: cya:CYA_0495 hypothetical protein. (207 aa)    
Predicted Functional Partners:
Noca_4036
PFAM: Ethanolamine utilization protein EutN/carboxysome structural protein Ccml; KEGG: rba:RB2581 probable ethanolamine utilization protein EutN.
 
 
 0.954
Noca_4030
PFAM: microcompartments protein; KEGG: dsy:DSY4991 hypothetical protein.
 
 
 
 0.930
Noca_4026
Hypothetical protein.
       0.773
Noca_4028
TIGRFAM: ethanolamine utilization protein EutJ family protein; PFAM: cell division protein FtsA; KEGG: dde:Dde_3275 ethanolamine utilization protein EutJ.
 
  
 0.729
Noca_4029
PFAM: protein of unknown function DUF861, cupin_3; Ethanolamine utilisation EutQ family protein; KEGG: ecj:JW2444 conserved hypothetical protein.
 
  
 0.676
Noca_4031
Acetaldehyde dehydrogenase; KEGG: lin:lin1143 hypothetical protein.
 
  
 0.551
Noca_4032
PFAM: microcompartments protein; KEGG: dsy:DSY4965 hypothetical protein.
  
  
 0.517
Noca_4033
PFAM: Ethanolamine ammonia-lyase light chain; KEGG: dsy:DSY4961 hypothetical protein.
  
  
 0.482
Noca_4034
Ethanolamine ammonia-lyase heavy chain; PFAM: Ethanolamine ammonia lyase large subunit; KEGG: ctc:CTC02176 ethanolamine ammonia-lyase heavy chain.
  
  
 0.456
Noca_4025
TIGRFAM: nitrite reductase [NAD(P)H], small subunit; PFAM: Rieske [2Fe-2S] domain protein; KEGG: fra:Francci3_0795 nitrite reductase (NAD(P)H) large subunit, NirD.
       0.434
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.