STRINGSTRING
Noca_4040 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4040" - CarD family transcriptional regulator in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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Gene Fusion
Cooccurence
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[Homology]
Score
Noca_4040CarD family transcriptional regulator (161 aa)    
Predicted Functional Partners:
rpoB
DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates (1166 aa)
   
 
      0.692
Noca_4039
Hypothetical protein (200 aa)
              0.617
ctc
50S ribosomal protein L25; This is one of the proteins that binds to the 5S RNA in the ribosome where it forms part of the central protuberance (223 aa)
 
          0.519
Noca_0762
Flagellar basal-body rod protein FlgB (118 aa)
   
          0.475
Noca_4041
Hypothetical protein (290 aa)
              0.472
Noca_0635
4Fe-4S ferredoxin (544 aa)
              0.410
Noca_4303
4Fe-4S ferredoxin (114 aa)
              0.408
Noca_4038
4-diphosphocytidyl-2C-methyl-D-erythritol synthase (223 aa)
              0.408
ispF
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase; Involved in the biosynthesis of isopentenyl diphosphate (IPP) and dimethylallyl diphosphate (DMAPP), two major building blocks of isoprenoid compounds. Catalyzes the conversion of 4- diphosphocytidyl-2-C-methyl-D-erythritol 2-phosphate (CDP-ME2P) to 2-C-methyl-D-erythritol 2,4-cyclodiphosphate (ME-CPP) with a corresponding release of cytidine 5-monophosphate (CMP) (164 aa)
              0.408
cysS
cysteinyl-tRNA synthetase (471 aa)
              0.408
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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