STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4041Hypothetical protein; KEGG: fal:FRAAL6457 putative integral membrane protein. (290 aa)    
Predicted Functional Partners:
Noca_3586
Hypothetical protein; KEGG: sma:SAV3318 putative RNA polymerase ECF-subfamily sigma factor.
  
 
   0.739
Noca_1922
Hypothetical protein.
  
    0.692
Noca_4019
PFAM: metallophosphoesterase; KEGG: swo:Swol_2226 hypothetical protein.
  
     0.676
Noca_0189
KEGG: sco:SCO2686 LuxR-family transcriptional regulator.
  
     0.658
Noca_3688
PFAM: extracellular solute-binding protein, family 1; KEGG: bcl:ABC3585 sugar ABC transporter substrate-binding protein; TC 3.A.1.1.-.
 
     0.633
Noca_0488
KEGG: sma:SAV4734 hypothetical protein.
  
 
 
 0.609
Noca_4290
PFAM: ATP-binding region, ATPase domain protein domain protein; KEGG: sco:SCO0542 hypothetical regulatory protein.
  
     0.605
Noca_4606
PFAM: GCN5-related N-acetyltransferase; KEGG: sco:SCO4151 acetyltransferase.
  
    0.565
Noca_4411
PFAM: FAD-binding 9, siderophore-interacting domain protein; KEGG: cgb:cg0767 siderophore-interacting protein.
  
     0.559
Noca_3078
KEGG: fra:Francci3_1400 hypothetical protein.
  
     0.556
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.