Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4057KEGG: cch:Cag_1235 hypothetical protein. (910 aa)    
Predicted Functional Partners:
Noca_4056
Peptidase M4, thermolysin; Extracellular zinc metalloprotease.
   
 
 0.786
Noca_3972
PFAM: PKD domain containing protein; KEGG: sde:Sde_3982 protein of unknown function DUF37.
 
  
 0.624
Noca_1605
PFAM: protein of unknown function DUF214; KEGG: sco:SCO6365 putative integral membrane protein.
  
    0.539
Noca_4058
PFAM: pyridoxamine 5'-phosphate oxidase-related, FMN-binding; KEGG: rha:RHA1_ro05058 hypothetical protein.
       0.495
Noca_4059
KEGG: cch:Cag_1235 hypothetical protein.
 
    
0.492
Noca_0718
KEGG: hne:HNE_2670 putative lipoprotein.
 
 
 0.424
Noca_2941
Hypothetical protein.
 
   0.423
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: low (12%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.