STRINGSTRING
Noca_4057 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4057" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4057Hypothetical protein (910 aa)    
Predicted Functional Partners:
Noca_4056
Peptidase M4, thermolysin (430 aa)
              0.829
Noca_4058
Pyridoxamine 5’-phosphate oxidase-like protein (184 aa)
              0.554
Noca_4059
Hypothetical protein (587 aa)
 
       
0.532
Noca_1664
TetR family transcriptional regulator (189 aa)
   
          0.472
Noca_3941
Forkhead-associated protein (349 aa)
   
          0.449
Noca_4376
Putative integral membrane protein (250 aa)
   
          0.445
Noca_0197
Alpha amylase catalytic subunit (925 aa)
   
          0.441
Noca_2458
Hypothetical protein (175 aa)
   
          0.421
Noca_3076
Hypothetical protein (153 aa)
   
          0.418
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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