STRINGSTRING
Noca_4065 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4065" - Luciferase family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4065Luciferase family protein (344 aa)    
Predicted Functional Partners:
Noca_4069
Hypothetical protein (166 aa)
 
          0.933
Noca_4068
Endoribonuclease L-PSP (405 aa)
 
          0.925
Noca_4071
Thiolase (382 aa)
 
          0.904
Noca_4070
Dehydratase (147 aa)
 
          0.887
Noca_4072
Hypothetical protein (142 aa)
 
          0.879
Noca_1409
F420-dependent oxidoreductase (321 aa)
 
     
  0.868
Noca_4074
3-hydroxybutyryl-CoA dehydrogenase (287 aa)
         
  0.866
Noca_4073
acyl-CoA dehydrogenase domain-containing protein (386 aa)
   
   
  0.863
Noca_4066
L-carnitine dehydratase/bile acid-inducible protein F (409 aa)
              0.863
Noca_4064
Dehydratase (173 aa)
              0.861
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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