STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4069KEGG: mpa:MAP1460 hypothetical protein. (166 aa)    
Predicted Functional Partners:
Noca_0671
PFAM: MaoC domain protein dehydratase; KEGG: sco:SCO4637 hypothetical protein.
  
 
 0.976
Noca_4070
PFAM: MaoC domain protein dehydratase; KEGG: deh:cbdb_A489 hypothetical protein.
 
   
 0.915
Noca_4071
Thiolase; KEGG: pol:Bpro_5279 thiolase.
 
 
 0.895
Noca_4068
PFAM: Endoribonuclease L-PSP; KEGG: bbr:BB1154 hypothetical protein.
 
    0.894
Noca_4072
PFAM: protein of unknown function DUF35; KEGG: rha:RHA1_ro05826 hypothetical protein.
 
   0.884
Noca_4065
PFAM: luciferase family protein; KEGG: mmc:Mmcs_3213 luciferase-like protein.
 
    0.856
Noca_4073
PFAM: acyl-CoA dehydrogenase domain protein; Acyl-CoA dehydrogenase, type 2, C-terminal domain; KEGG: bxe:Bxe_A4085 putative acyl-CoA dehydrogenase.
  
  0.849
Noca_4067
PFAM: MmgE/PrpD family protein; KEGG: bur:Bcep18194_B1168 MmgE/PrpD family protein.
 
     0.840
Noca_4064
PFAM: MaoC domain protein dehydratase; KEGG: pol:Bpro_5294 MaoC-like dehydratase.
 
     0.827
Noca_4066
PFAM: L-carnitine dehydratase/bile acid-inducible protein F; KEGG: bxe:Bxe_A4084 putative L-carnitine dehydratase/bile acid-inducible protein F; Belongs to the CoA-transferase III family.
  
 
 0.819
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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