Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Noca_4079PFAM: HpcH/HpaI aldolase; KEGG: rxy:Rxyl_0366 citryl-CoA lyase; Belongs to the HpcH/HpaI aldolase family. (283 aa)    
Predicted Functional Partners:
Noca_4394
Citryl-CoA lyase; PFAM: HpcH/HpaI aldolase; KEGG: fal:FRAAL5522 citrate lyase beta subunit; Belongs to the HpcH/HpaI aldolase family.
 
  
0.932
Noca_4077
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: ctc:CTC00811 fumarate reductase flavoprotein subunit precursor.
 
    0.823
Noca_4064
PFAM: MaoC domain protein dehydratase; KEGG: pol:Bpro_5294 MaoC-like dehydratase.
 
  
 0.820
Noca_1459
PFAM: MaoC domain protein dehydratase; KEGG: sco:SCO6470 hypothetical protein.
 
  
 0.748
Noca_4075
PFAM: fumarate reductase/succinate dehydrogenase flavoprotein domain protein; HI0933 family protein; FAD dependent oxidoreductase; FAD-dependent pyridine nucleotide-disulphide oxidoreductase; KEGG: sfr:Sfri_2586 flavocytochrome c.
 
    0.662
Noca_4078
Hypothetical protein.
       0.658
Noca_3184
Fructose PTS system EIIBC or EIIC component; TIGRFAM: PTS system, fructose-specific, IIB subunnit; PTS system, fructose subfamily, IIA subunit; PTS system, fructose subfamily, IIC subunit; PFAM: phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2; phosphotransferase system, EIIC; phosphotransferase system PTS, fructose-specific IIB subunit; KEGG: mmc:Mmcs_0080 phosphotransferase system, fructose IIC component; TC 4.A.2.1.4; TC 4.A.2.1.4; TC 4.A.2.1.4.
  
  
 0.646
Noca_4109
PFAM: MaoC domain protein dehydratase; KEGG: tth:TTC0237 dehydrogenase.
 
  
 0.634
Noca_0381
L-ribulose 5-phosphate 4-epimerase; PFAM: class II aldolase/adducin family protein; KEGG: blo:BL0273 L-ribulose-5-phosphate 4-epimerase.
   
    0.629
Noca_0398
PFAM: class II aldolase/adducin family protein; KEGG: cpf:CPF_1051 L-fuculose phosphate aldolase.
   
    0.629
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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