STRINGSTRING
Noca_4081 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4081" - Alpha/beta hydrolase fold protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4081Alpha/beta hydrolase fold protein (302 aa)    
Predicted Functional Partners:
Noca_4082
Extracellular solute-binding protein (526 aa)
              0.741
Noca_0210
Alpha/beta hydrolase fold protein (279 aa)
   
          0.484
Noca_4083
L-carnitine dehydratase/bile acid-inducible protein F (398 aa)
              0.433
Noca_4458
Aldehyde oxidase and xanthine dehydrogenase (670 aa)
   
          0.400
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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