STRINGSTRING
Noca_4082 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4082" - Extracellular solute-binding protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4082Extracellular solute-binding protein (526 aa)    
Predicted Functional Partners:
Noca_4093
Binding-protein-dependent transport systems inner membrane component (321 aa)
  0.944
Noca_4092
Binding-protein-dependent transport system inner membrane protein (346 aa)
  0.944
Noca_2399
Binding-protein-dependent transport system inner membrane protein (336 aa)
  0.941
Noca_2401
Binding-protein-dependent transport systems inner membrane component (338 aa)
  0.940
Noca_4090
Oligopeptide/dipeptide ABC transporter ATPase (358 aa)
  0.939
Noca_2403
Oligopeptide/dipeptide ABC transporter ATPase (425 aa)
  0.939
Noca_4091
Oligopeptide/dipeptide ABC transporter ATPase (339 aa)
 
  0.933
Noca_2402
Oligopeptide/dipeptide ABC transporter ATPase (347 aa)
 
  0.933
Noca_4081
Alpha/beta hydrolase fold protein (302 aa)
              0.741
Noca_3006
DNA polymerase I (889 aa)
         
  0.558
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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