Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4091KEGG: bxe:Bxe_A0185 ABC dipeptide/oligopeptide/nickel transporter, ATPase subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily. (339 aa)    
Predicted Functional Partners:
Noca_4092
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: bcl:ABC1242 oligopeptide ABC transporter permease.
 0.999
Noca_4093
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: psp:PSPPH_2785 ABC-transport protein, inner membrane component.
 
 0.998
Noca_2399
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sco:SCO5476 oligopeptide transport integral membrane protein.
 0.997
Noca_4090
KEGG: ttj:TTHA0473 peptide ABC transporter, ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
 
0.995
Noca_2401
PFAM: binding-protein-dependent transport systems inner membrane component; KEGG: sma:SAV3152 putative ABC transporter membrane protein BldKC.
 
 0.993
Noca_4082
PFAM: extracellular solute-binding protein, family 5; KEGG: bcl:ABC1605 oligopeptide ABC transporter substrate-binding protein.
 
 0.988
Noca_2400
PFAM: extracellular solute-binding protein, family 5; KEGG: sma:SAV3151 ABC transporter protein BldKB.
 
 0.968
Noca_2403
KEGG: sco:SCO5116 putative peptide transport system ATP-binding subunit; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
 
  
 
0.921
Noca_2402
Oligopeptide/dipeptide ABC transporter, ATPase subunit; KEGG: sma:SAV2766 putative ABC transporter ATP-binding protein; TIGRFAM: oligopeptide/dipeptide ABC transporter, ATPase subunit; PFAM: ABC transporter related; Oligopeptide/dipeptide ABC transporter, C-terminal domain protein; SMART: AAA ATPase; Belongs to the ABC transporter superfamily.
  
  
 
0.913
Noca_4573
Amino acid ABC transporter ATP-binding protein, PAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sma:SAV6281 putative ABC transporter ATP-binding protein - glutamine transport; TC 3.A.1.3.-.
 
 
  
0.900
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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