STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4115Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: bpa:BPP0593 putative branched-chain amino acid transport system permease protein; TC 3.A.1.4.-. (287 aa)    
Predicted Functional Partners:
Noca_4114
PFAM: inner-membrane translocator; KEGG: tde:TDE2365 high-affinity branched-chain amino acid ABC transporter, permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
Noca_4123
PFAM: inner-membrane translocator; KEGG: gsu:GSU1732 branched-chain amino acid ABC transporter, permease protein; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
 0.989
Noca_4113
Amino acid/amide ABC transporter ATP-binding protein 1, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rpc:RPC_0111 ABC transporter related; TC 3.A.1.4.-.
 
  
 0.961
Noca_4112
Amino acid/amide ABC transporter ATP-binding protein 2, HAAT family; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: pol:Bpro_0356 ABC transporter related; TC 3.A.1.4.-.
 
  
 0.960
Noca_4122
Amino acid/amide ABC transporter membrane protein 1, HAAT family; PFAM: inner-membrane translocator; KEGG: bbr:BB4292 branched-chain amino acid transport system permease; TC 3.A.1.4.-.
 
  
 
0.950
Noca_2146
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: rpd:RPD_1891 ABC transporter related; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
 
  
 0.935
Noca_0216
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: dra:DRA0261 branched-chain amino acid transport system ATP-binding protein; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
 0.930
Noca_4103
Branched-chain amino acid transport system permease protein; PFAM: inner-membrane translocator; ABC transporter related; SMART: AAA ATPase; KEGG: bpe:BP0620 branched-chain amino acid ABC transporter, permease protein; TC 3.A.1.4.-; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
 0.928
Noca_4117
PFAM: Extracellular ligand-binding receptor; KEGG: bxe:Bxe_B1023 ABC branched chain amino acid family transporter, periplasmic ligand binding protein; TC 3.A.1.4.-.
 
  
 0.916
Noca_0853
Amino acid/amide ABC transporter membrane protein 2, HAAT family; PFAM: inner-membrane translocator; KEGG: rxy:Rxyl_0195 inner-membrane translocator; TC 3.A.1.4.-; Belongs to the binding-protein-dependent transport system permease family.
  
 0.906
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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