STRINGSTRING
Noca_4119 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4119" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4119Hypothetical protein (133 aa)    
Predicted Functional Partners:
Noca_4118
Beta-ketoacyl synthase (408 aa)
              0.859
Noca_4120
Short-chain dehydrogenase/reductase SDR (310 aa)
              0.730
Noca_4126
L-carnitine dehydratase/bile acid-inducible protein F (381 aa)
              0.593
Noca_4125
ABC transporter-like protein (235 aa)
              0.593
Noca_4124
ABC transporter-like protein (254 aa)
              0.593
Noca_4123
Inner-membrane translocator (352 aa)
              0.593
Noca_4122
Inner-membrane translocator (281 aa)
              0.593
Noca_4121
AMP-dependent synthetase and ligase (560 aa)
              0.593
Noca_4117
Extracellular ligand-binding receptor (391 aa)
              0.467
Noca_4116
AMP-dependent synthetase and ligase (499 aa)
              0.467
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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