Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_4137PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA0464 putative long-chain fatty-acid-CoA ligase. (554 aa)    
Predicted Functional Partners:
Noca_4139
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mbo:Mb2855 enoyl-CoA hydratase.
  
 
 0.805
Noca_4140
KEGG: nfa:nfa27940 hypothetical protein.
  
  
 0.791
Noca_4138
PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mmc:Mmcs_4067 2-nitropropane dioxygenase, NPD.
  
  
 0.788
Noca_4136
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: ade:Adeh_0250 carboxyl transferase.
  
 
 0.624
Noca_4133
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa25020 putative short chain dehydrogenase.
  
 
 0.585
Noca_4134
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rha:RHA1_ro07066 probable acyl-CoA dehydrogenase.
  
  
 0.566
Noca_4131
KEGG: nfa:nfa22710 putative lipid-transfer protein.
  
 
 0.563
Noca_4135
PFAM: MaoC domain protein dehydratase; KEGG: sma:SAV6603 hypothetical protein.
     
 0.563
Noca_4132
PFAM: protein of unknown function DUF35; KEGG: mpa:MAP0797 hypothetical protein.
  
    0.503
Noca_2129
KEGG: rpd:RPD_3222 phenylacetate--CoA ligase.
 
  
 0.469
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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