STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4138PFAM: 2-nitropropane dioxygenase, NPD; KEGG: mmc:Mmcs_4067 2-nitropropane dioxygenase, NPD. (324 aa)    
Predicted Functional Partners:
Noca_4139
PFAM: Enoyl-CoA hydratase/isomerase; KEGG: mbo:Mb2855 enoyl-CoA hydratase.
  
  
 0.816
Noca_4140
KEGG: nfa:nfa27940 hypothetical protein.
   
   0.799
Noca_4137
PFAM: AMP-dependent synthetase and ligase; KEGG: rpa:RPA0464 putative long-chain fatty-acid-CoA ligase.
  
  
 0.786
Noca_2744
PFAM: coenzyme A transferase; KEGG: sma:SAV6202 putative glutaconate CoA-transferase, subunit A.
  
  
 0.711
Noca_2745
KEGG: nfa:nfa5080 putative CoA transferase beta subunit.
  
    0.662
Noca_1990
KEGG: tfu:Tfu_1973 acyl-carrier-protein S-malonyltransferase.
  
  
 0.625
Noca_4133
PFAM: short-chain dehydrogenase/reductase SDR; KEGG: nfa:nfa25020 putative short chain dehydrogenase.
  
  
 0.586
Noca_4135
PFAM: MaoC domain protein dehydratase; KEGG: sma:SAV6603 hypothetical protein.
  
    0.559
Noca_4134
PFAM: acyl-CoA dehydrogenase domain protein; KEGG: rha:RHA1_ro07066 probable acyl-CoA dehydrogenase.
  
  
 0.558
Noca_4136
Propionyl-CoA carboxylase; PFAM: carboxyl transferase; KEGG: ade:Adeh_0250 carboxyl transferase.
       0.549
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.