STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4146PFAM: inner-membrane translocator; KEGG: sme:SMa2367 putative ABC transporter, permease; Belongs to the binding-protein-dependent transport system permease family. (366 aa)    
Predicted Functional Partners:
Noca_4145
PFAM: inner-membrane translocator; KEGG: mlo:mll4174 sugar ABC transporter, permease protein, rbsC-2; Belongs to the binding-protein-dependent transport system permease family.
 
 0.996
Noca_4147
Nucleoside ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: jan:Jann_1303 ABC transporter related.
 
 
 0.995
Noca_4148
PFAM: basic membrane lipoprotein; KEGG: mlo:mll4178 hypothetical protein, contains weak similarity to membrane lipoprotein.
 
 
 0.992
Noca_4192
Nucleoside ABC transporter membrane protein; PFAM: inner-membrane translocator; KEGG: rxy:Rxyl_0158 inner-membrane translocator; Belongs to the binding-protein-dependent transport system permease family.
 
 0.982
Noca_3540
Nucleoside ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: sco:SCO4886 putative sugar ABC transporter ATP-binding protein.
 
 
 0.981
Noca_4194
Nucleoside ABC transporter ATP-binding protein; PFAM: ABC transporter related; SMART: AAA ATPase; KEGG: rxy:Rxyl_0156 ABC transporter related.
 
 
 0.981
Noca_3541
PFAM: basic membrane lipoprotein; KEGG: sco:SCO4885 putative lipoprotein.
 
 
 0.969
Noca_4195
PFAM: basic membrane lipoprotein; KEGG: rxy:Rxyl_0155 basic membrane lipoprotein.
 
 
 0.969
Noca_3538
PFAM: inner-membrane translocator; KEGG: sma:SAV3367 putative sugar ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
 
0.948
Noca_3539
PFAM: inner-membrane translocator; KEGG: sco:SCO4887 putative sugar ABC transporter integral membrane protein; Belongs to the binding-protein-dependent transport system permease family.
  
  
 
0.927
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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