STRINGSTRING
Noca_4149 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_4149" - Purine catabolism PurC domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4149Purine catabolism PurC domain-containing protein (509 aa)    
Predicted Functional Partners:
Noca_0637
Purine catabolism PurC domain-containing protein (486 aa)
   
          0.757
Noca_0087
CdaR family transcriptional regulator (383 aa)
   
          0.752
Noca_4276
CdaR family transcriptional regulator (552 aa)
   
          0.717
Noca_0097
Regulator of polyketide synthase expression-like (524 aa)
   
          0.657
Noca_4150
Hypothetical protein (170 aa)
              0.628
Noca_4148
Basic membrane lipoprotein (357 aa)
              0.612
Noca_4147
ABC transporter-like protein (524 aa)
              0.612
Noca_4146
Inner-membrane translocator (366 aa)
              0.612
Noca_4145
Inner-membrane translocator (299 aa)
              0.612
Noca_4144
Cytosine deaminase (154 aa)
              0.549
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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