STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4153KEGG: noc:Noca_0728 hypothetical protein. (863 aa)    
Predicted Functional Partners:
Noca_4154
PFAM: bifunctional deaminase-reductase domain protein; KEGG: tfu:Tfu_1316 hypothetical protein.
     
 0.621
Noca_4157
PFAM: glycosyl transferase, family 2; KEGG: tfu:Tfu_1732 hypothetical protein.
     
 0.619
Noca_4155
KEGG: tfu:Tfu_1315 hypothetical protein.
       0.618
Noca_4156
Dihydropteroate synthase; Catalyzes the condensation of para-aminobenzoate (pABA) with 6-hydroxymethyl-7,8-dihydropterin diphosphate (DHPt-PP) to form 7,8- dihydropteroate (H2Pte), the immediate precursor of folate derivatives.
       0.618
Noca_4152
KEGG: mpa:MAP2481c hypothetical protein.
       0.533
Noca_4158
Transcriptional regulator, TetR family; PFAM: regulatory protein, TetR; KEGG: fal:FRAAL2897 putative transcription regulator TetR/AcrR family.
       0.460
Noca_4151
Hypothetical protein.
       0.429
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.