STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4169PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: tfu:Tfu_0873 sulfate permease, SulP family. (459 aa)    
Predicted Functional Partners:
Noca_4542
KEGG: rha:RHA1_ro01881 possible tyrosine protein phosphatase.
   
 
 0.782
Noca_2936
PFAM: Sulfate transporter/antisigma-factor antagonist STAS; sulphate transporter; KEGG: aeh:Mlg_1668 sulfate transporter.
  
     0.735
Noca_0532
KEGG: rha:RHA1_ro05921 probable NADH dehydrogenase subunit M; TIGRFAM: proton-translocating NADH-quinone oxidoreductase, chain M; PFAM: NADH/Ubiquinone/plastoquinone (complex I).
  
 
 0.670
Noca_2944
PFAM: Cytochrome b/b6, N-terminal domain; KEGG: oih:OB1775 menaquinol-cytochrome-c reductase cytochrome b subunit.
    
 
 0.610
Noca_3137
PFAM: Cytochrome b/b6, N-terminal domain; KEGG: pac:PPA0710 cytochrome b subunit.
    
 
 0.610
Noca_0709
Hypothetical protein; KEGG: mmc:Mmcs_0159 putative conserved transmembrane protein.
    
 
 0.581
Noca_2817
KEGG: sma:SAV5892 hypothetical protein.
    
 
 0.581
Noca_2818
KEGG: sma:SAV5893 hypothetical protein.
    
 
 0.581
pckG-2
Phosphoenolpyruvate carboxykinase (GTP); Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle.
  
    0.550
Noca_1147
Hypothetical protein.
  
   0.504
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.