Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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Co-expression
Experiments
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[Homology]
Score
Noca_4174PFAM: FAD linked oxidase domain protein; KEGG: sco:SCO5966 putative oxidase. (1000 aa)    
Predicted Functional Partners:
Noca_4176
PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: rha:RHA1_ro08313 probable mandalate racemase.
 
  
 0.876
Noca_4175
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: mpa:MAP3255 pyruvate decarboxylase; Belongs to the TPP enzyme family.
 
 
 0.857
Noca_4173
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro08310 short chain dehydrogenase.
 
  
 0.818
Noca_4177
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nfa:nfa35140 putative dehydrogenase.
 
  
 0.783
Noca_4178
PFAM: glycoside hydrolase 15-related; KEGG: tfu:Tfu_1345 hypothetical protein.
 
     0.773
Noca_4179
Hypothetical protein.
       0.723
Noca_0640
PFAM: electron transfer flavoprotein beta-subunit; KEGG: sco:SCO1082 putative electron transfer flavoprotein, beta subunit.
  
 
 0.630
Noca_1815
PFAM: electron transfer flavoprotein beta-subunit; KEGG: sco:SCO1082 putative electron transfer flavoprotein, beta subunit.
  
 
 0.630
Noca_3507
PFAM: protein of unknown function DUF224, cysteine-rich region domain protein; KEGG: fra:Francci3_2007 FAD linked oxidase-like.
  
 0.628
Noca_0639
PFAM: electron transfer flavoprotein beta-subunit; electron transfer flavoprotein, alpha subunit; KEGG: sco:SCO1081 putative electron transfer flavoprotein, alpha subunit.
  
 
 0.626
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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