Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
Noca_4178PFAM: glycoside hydrolase 15-related; KEGG: tfu:Tfu_1345 hypothetical protein. (602 aa)    
Predicted Functional Partners:
Noca_4177
PFAM: Alcohol dehydrogenase, zinc-binding domain protein; Alcohol dehydrogenase GroES domain protein; KEGG: nfa:nfa35140 putative dehydrogenase.
 
     0.803
Noca_4173
PFAM: short-chain dehydrogenase/reductase SDR; KR; KEGG: rha:RHA1_ro08310 short chain dehydrogenase.
 
     0.779
Noca_4176
PFAM: Mandelate racemase/muconate lactonizing enzyme, N-terminal domain protein; Mandelate racemase/muconate lactonizing enzyme, C-terminal domain protein; KEGG: rha:RHA1_ro08313 probable mandalate racemase.
 
     0.779
Noca_4175
PFAM: thiamine pyrophosphate enzyme domain protein TPP-binding; thiamine pyrophosphate enzyme, central region; thiamine pyrophosphate enzyme TPP binding domain protein; KEGG: mpa:MAP3255 pyruvate decarboxylase; Belongs to the TPP enzyme family.
 
     0.775
Noca_4174
PFAM: FAD linked oxidase domain protein; KEGG: sco:SCO5966 putative oxidase.
 
     0.773
Noca_4179
Hypothetical protein.
       0.773
Noca_3994
Trehalose 6-phosphate synthase; PFAM: glycosyl transferase, family 20; KEGG: pac:PPA0961 alpha,alpha-trehalose-phosphate synthase.
 
   
 0.650
Noca_3989
Trehalose 6-phosphatase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose.
 
   
 0.526
Noca_4180
KEGG: blo:BL0495 narrowly conserved hypothetical protein.
       0.505
gmd
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4-dehydro-6- deoxy-D-mannose.
       0.430
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.