Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
Noca_4185PFAM: lipopolysaccharide biosynthesis; KEGG: fal:FRAAL5660 putative tyrosine-protein kinase. (473 aa)    
Predicted Functional Partners:
Noca_4219
PFAM: sugar transferase; KEGG: bth:BT0611 glycosyltransferase.
 
  
 0.978
Noca_4184
Polysaccharide biosynthesis protein CapD; PFAM: NAD-dependent epimerase/dehydratase; short-chain dehydrogenase/reductase SDR; 3-beta hydroxysteroid dehydrogenase/isomerase; polysaccharide biosynthesis protein CapD; dTDP-4-dehydrorhamnose reductase; Male sterility C-terminal domain; KR; KEGG: fal:FRAAL5661 dTDP-glucose 4,6-dehydratase transmembrane protein putative capsular polysaccharide biosynthesis protein.
 
  
 0.958
Noca_3002
PFAM: polysaccharide biosynthesis protein; KEGG: rha:RHA1_ro05189 possible xylose transporter.
  
  
 0.821
Noca_1445
Protein of unknown function DUF59; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.695
Noca_0022
PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: tfu:Tfu_3066 tyrosine protein kinase:serine/threonine protein kinase:PASTA.
   
 
 0.675
Noca_3086
PFAM: protein kinase; PASTA domain containing protein; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: sco:SCO2110 putative eukaryotic-type serine/threonine protein kinase.
   
 
 0.675
Noca_3705
PFAM: protein of unknown function RIO1; protein kinase; SMART: tyrosine protein kinase; serine/threonine protein kinase; KEGG: lxx:Lxx00220 serine/threonine kinase.
   
 
 0.675
Noca_2935
Protein of unknown function DUF59; Binds and transfers iron-sulfur (Fe-S) clusters to target apoproteins. Can hydrolyze ATP; Belongs to the Mrp/NBP35 ATP-binding proteins family.
  
 
 0.664
Noca_0245
PFAM: transferase hexapeptide repeat containing protein; KEGG: sma:SAV7039 sugar acetyltransferase.
  
  
 0.648
cysC
Adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the low molecular weight phosphotyrosine protein phosphatase family.
 
 
 0.636
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614
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